Browse of TCMCG060C12669 protein

CDS

Accession Number	TCMCG060C12669
gbkey	CDS
Protein Id	XP_025013888.1
Location	complement(join(533165..533775,535295..535666,535997..536430,536432..537003,537665..537960,538342..538420,538549..538636,539394..539517,539585..539852,540019..541374,541916..542185,542798..543044,543839..543898,544573..544905,545043..545121,546218..546297,546397..546471,548695..548775,548859..548946,549187..549273,549403..549542,549665..549738,550507..550530))
Gene	LOC8282187
GeneID	8282187
Organism	Ricinus communis

Protein

Length	1946aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA34677
db_source	XM_025158120.1
Definition	LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13 [Ricinus communis]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACAAATGTTTTTAGAATTGGAAATCTTAATCATATATCATGGTTCCAGTTTATCCCGAATGAATCTGATTTAAACACTTTACCAGATAAGAGTACAAAATTAGAGCAGAAAGATGCTGCAACATGGCTTGTGCTTTGGTCTCATTTGCAGTTGCAGAAAGATGGATTTCTCAGTACATGGACCAATTCCTTTGTCGGACCTTGGGATCCTTCTCAGGGTTTGCATAATCCTGATGAGAAAATTAAGCTCTGGCTTTTCCTTCCTGGACACCACTCTTCTGTTGTTGAGCGCGCCCAAGCTGCAGTTTCTAGATTAAGGGTTGTTGCATCTGGAGTTTGGGTGGCTCCTGGGGACTCTGAAGAAGTTGCTGCTGCTCTTTCTCAGTCTTTAAGGAATTGTATAGAAAAAGCACTTGTTGGACTTTCTTACATGAGATTTGGAGACGTATTTTCAAAATATCACCAATCTCAAAGTGAAGGACTCTTCAGAAGACAGCCTACGGTTGAGTTCATCTTTGCTGCCACTGAAGAGGCAATCTTTGTGCATGTTATAATATCTGCAAAGCATATCCGAGCGCTTTCAAGTGGTGACATAGAAAGGGTGTTAAATCATTCTTCTAACAGTTCTGGTTACAGACTTCCAGTGATTGTTTCTCCTCATGGAATGCGTGGTTGGCTCACAGGATATTTTCCAAGTGATCTTGTCAAGCAAGTATATTTCAGCAGTTCCGGCAAATTTAGGACTTCAAATGGATTTATAGGTGTACCATGTCATGTTTCTCAAGGGCCCGGGTGCATGCTGAGGGGCCAAAATTGCTATGTTGAAGTGACACTTGGTTGTCCTAGAACGGAAAGCGAAAAGGGGTTGAGGTCAAACTCAAATTCGATCAGGAACTTACCTAAGATTCATGTTGTGGAATCCCCAGCTGTGGGAAGAGGTGATTATAAGGGATCACTGGATTATCCTTCTGCACATGAGAAAACATTTATCTACCCAGCCGAGGCAGTTGTTGTTCCAGTCTTGCACACATCATATGCTCGATCTTCTCTGAAAAGGTTTTGGCTCCAAAATTGGATAGGGCCGTCATTGCCTGCTTCATCTTTCTTTATGCATTGTGGTGGTGACATAGATAACATGGAAGGATCGTGGATTGAATCTAATGGAGTGCGTATGCGACATGGCTGTAATAGTAGTAGCAATAGTAATAGTAGCAGCATTGGCTCCTTAAGCAGCAGCTCCAGTGATAGTGATCCTAAAAGAACCGGAGAAGCTGGTGACCTCGAGGCAGATGCAGATTCATTATCATGTAGACAGTCTGGTTTATCTTCTAATGATCAGATGGAAATTGATGGCCCCAAATTGGGTACTAAGCGTCCTCGTACAGGGATGCCAGAATCATTTGGTCAAATGGGAGCAATGAAAAATAATTTAATGCAAGATGCATACAAGTCTGATTTTGGTTCTCTTGAAATTAGTAATTCTGCCATCACAGGAGTTGCAAATGAGCAGATTGGAACTCATTTAGATTGGGATGATGATGACAGAGGTATAGGGATTAATATCCAAGCTCTTCTATCTGAGTTTGGTGATTTTGACGATTTCTTTCAGAATGACGTGCTGCCTTTTGGAGAGCCTCCTGGTACAGCAGAGTCACAGGCTCTTATGTTTTCTGCTCCAGATTGTGGAGAAGTTGTTAGCAGTCCTATTGGGGTAATGGATGTTGCAGATCAAATGCTTTTGCCTGTGAGCTTTCCATCATTTGAGAGCTTTAATCCACCTCCTGCAGAAGCCATAGATGAGTGTGTCAGCAAAAATCGAGAAAGCACACTTGAACCTTTGACATCATGTCCAGTGCAGCACACTCCACCACCTTCTACAGGTGAGTTTGAGCATTTGATCAAAGCTGAAGCTCTGATGTCCTTTGCTCCAGAATATGGAGCTGTTGAGACCCAGACGAGTGAGCTTTCCTCGTCAATTTTCAGAAGTCCATATTATCCAAAGTCTCGCAAAGTTGAAAGTTCAAATTCAAGCCCAAACAATTACAGATATGGTGCAACTCCACCCTCATCTCCTTGCATTGATGGATCAGATGAGAAGACTAGCATGACTGTGAATCCAAAAGCAGGGACTGCACGTGTGGACACAAAGAAATATTACACTCATGTGGAGAGTGGGAAGGAGCAACATGATAGAAAATTATTCACACAAACTGATAGCATTGCTACTAGTGATGGGATAGTGCCATCTTCTTTCTCTACCTTTGATTCTACAAATGCTGTTAAATCTGTTCTGAAGAAAATGACTGAATCTGCTGTAGGATCAGAAAGTTTCATACTTTCTATGAAGACTGTGTTGGCAACTGAAGTTGAATCTCTTATGTTCCAAGCTTACATGTGCAGAGTTCGCCACATACTGTTATCTTCCTCTAACCCTACATCTGTAAGTTTGAGTAGGTTAAGCAGCAGCTCTGTTTTGGGTGACCTACCGGGTGAGGGGAGTACAATGACAGACAATATATCTAGCAGGTATGAGGTGAAGAAGAAAGAATCGATACCTGTCAGAATTGCTGGTGATTTTGATGGGGGAGTGCTAGATGGTCATCTCAATGCACCTGTTGGTGTTTGGCGGTCTGTTGCAGTTCCTAAATTAACCAAACCTAGTAATTCACCAAGTATTGAAGTCAGTACATCCTTACCTCATCATTCATTGAATGATGAAAGAATGTTTTCGTATAAACATAGGCAGCCACTACAGGAGCTACTTGATGGGATGTCATTACTTGTTCAGCAAGCCACCTCCTTTGTTGATGTGGCTCTGGATGCTGATTGTGGTGATGGTCCTTATGGTTGGCTTGCACTACAAGAGCATTGGAGGCGAGGTTTCTCTTGCGGTCCTTCCATGGTCCATGCAGGATGTGGGGGGACTTTGGCTTCTTGCCATTCCTTGGACGTTGCTGGCATGCAGCTAGTGGATCCACTTTCTTCTGATATTCATGCCCCCTCTGTTATTAGCTTGCTTCAGTCTGAAATCAAAACAGCCTTAAAATCTGCCTTTGGGAATTTGGATGGCCCATTATCAGTCACTGATTGGTGCAGAGGCCGTGGTCAGTCAGGTGATGGAGTTTCCACAGTTGATGGATCTTATGCTGAATCTATGTTAAGCGAGTGCAAGGATTCTTCAAGCACTGTATGTTTATCTGTTGGAGAACCAATGAGTCCAGCCCAGTCTTCTGCTGGTGCATCTTCTTGCCTTAAAGTTGATGGTGCTAAAGCAGATGACACTGGGCAAAGGAGATTGAGCCAAGAAATAGAGTCGGAGCAGCTATCGAGTTCCCGAAGGCCAACAGTTTTTGTTCTTCCTTCCCCTGCTGTACTTGTTGGGTATCAGGACGATTGGCTTAAGACACCAGCAAGCTCTTTACAACTCTGGGAGAAGGCTCCTTTTGAACCATATGCTTCGCCAAAACCTATTACTTATTGTGTTATATGTCCAGACATTGACCCCCTTACTTCTGCTGCTGCCGATTTTTTTCAGCAACTTGGAACTGTTTATGAGACATGCAAATTGGGAACTCATCAACCTCAGAGTTTGGGAAACCAAATGGAGATAGACACAGGGAAGTTATCATATTCTGGTTTCGTTCTTCTTGACTGCCCACAATCAATGAAGATAGAAAGCAGTAATACGTCTCTTGTGGGTTCAATAAGTGATTATTTTCTCTCTCTCTCCAATGGCTGGGACATGACAAGCTATCTTAAATCTCTTTCAAAGGCTGTTAAAGCTTTGAAAATCGGTCCGTGCTTATCAACAAACCCCAAAGAAGGAAATACTGGCCCTTGTATGGTCATCTACGTGGTCTGCCCCTTTCCTGAACCTATTGCAGTTTTACAAACTGTCATTGAATCTTCTGTTGCTGTTGGATCAACATTTCTCTCATCAGATAGAGAGAGGAGGCAGGCCTTGCTGAGTCAGGTTGGCAAGGCTTTAAGTTGCTCAGCAGTTGTGGATGAAGCATCGCCATCAAATGTTCTAGTACTTGCTGGTTTTAGCGTTCCTAAATTGGTATTGCAAATTGTGACAGTTGATGCCATTTTTAGGGTTGCGAGTCCTGCTCTAAATGAGCTTGTCATTCTTAAGGAGACCGCTTTCACTGTATACAACAAGGCTCGGCGAATTTCCAAAGGATTCTCAAATGATGTACAGTCATCAACATTGTCTGGTAGATCCCATTCTGTCATCCCACAAATGAATTCTATTCCAGCAATGTGGAAGGATTGTGTTGGTCCTAGACTTGGAGGACCTACACTACCAAGAGAGGGTGAAATGGATGCTGGCTTGAGATCAGGTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTGCATTTTTTTAATTTAACTGCTGAATCTTCAAAACTGTTGTCTGATGATAGCAGTGGAGGTTTCATGCAAAGTTCCAGTTCAGCAGTGAGTGCTGATACTGGATCTAGCTCTCAACTTGATGGGTCGGAGCCAGATGGCCTTGGAGGTGGTTATCAAAAGACTCTTCCAGGCCTACATTGTTGCTATGGATGGACAGAGGATTGGCGTTGGCTAGTGTGCATCTGGACAGATGCAAGGGGAGAATTGCTCGACAGCCATATATTCCCTTTTGGAGGAATTAGCAGTCGACAGGACACAAAGGGCTTGCAATGCCTTTTTGTGCAAGTTCTGCAGCAAGGATGTCAGATACTTCAGGCTTGCTCCTCCCCTGATATTGCTGCTGCAAAGCCCAGAGACTTTGTGATTACACGCATTGGAAATTTCTTTGAGCTTGAGTATTTAGAATGGCAGAAAGCTATTTATTCTGTTGCGGGTTCTGAGGTGAAGAAATGGCCCCTGCAACTGCGGCGATCTATGCCAGATGGGATGCCTGCAAGCAGTAATGGAGCTAACTTGCAGCAACAGGAGATGAGTTTAATGCAAGAGAGAAACCTTCCTTCTTCACCCAGTCCACTGTATAGCTCTCACTCTAAAGGTTCTGGCTTTATGAAGGGTGGTTTAGGACAATCTTCTGGAAGAAAACAGCTTATAGGTGGACACACAGTGGTTGATAACTCAAGGGGAATGCTTCAGTGGGTGCAGAGCATCAGTTTTGCTACAATTTCAATTGACCACTCTTTGAATCTGGTATTTCAAGCAGATTCACCTTCTCCTGGAGGAACTCAGGGTGGCAGTGGTGTTGGTGCATCTGGCTATCTTGAAGGTTTCACTCCTGTAAAGTCTCTTGGTTCTACTTCTGCATCTTATATTTTAATTCCATCACCTAGCATGCGCTTCCTCCCTCCAACACCTCTTCAGCTCCCCACATGTCTCACTGCTGAATCACCACCACTTGCACATCTCCTTCATAGCAAGGGCTCTGCAATTCCTCTCTCAACTGGTTTTGTTGTATCCAAAGCTGTGCCATCTATGGGGAAAGACTACAGAAGCAACTCAAGGGAGGAATGGCCTTCAGTTCTTTCTGTGAGTCTCATTGACTATTACGGAGGTACTAACATTGCCCAAGAAAAACTCTCTAGAGGGACTGGGAAGCAAGGAGTACGGACTTTAAGCTCAGAAGTTAGGGACTATGAAATTGAGATACACTTAATTCTAGAGTCTATAGCAGCGGAGCTTCATGCCTTGTCATGGATGACTGTGAGCCCAGCATATTTGGAGCGACGAACTGCACTGCCTTTCCACTGTGACATGGTTTTAAGGCTTAGAAGGCTGCTTCATTTTGCTGATAAGGAGCTATCTTCACAACCTGACAAGTCACAGTTATAG

Protein:   MWTNVFRIGNLNHISWFQFIPNESDLNTLPDKSTKLEQKDAATWLVLWSHLQLQKDGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGHHSSVVERAQAAVSRLRVVASGVWVAPGDSEEVAAALSQSLRNCIEKALVGLSYMRFGDVFSKYHQSQSEGLFRRQPTVEFIFAATEEAIFVHVIISAKHIRALSSGDIERVLNHSSNSSGYRLPVIVSPHGMRGWLTGYFPSDLVKQVYFSSSGKFRTSNGFIGVPCHVSQGPGCMLRGQNCYVEVTLGCPRTESEKGLRSNSNSIRNLPKIHVVESPAVGRGDYKGSLDYPSAHEKTFIYPAEAVVVPVLHTSYARSSLKRFWLQNWIGPSLPASSFFMHCGGDIDNMEGSWIESNGVRMRHGCNSSSNSNSSSIGSLSSSSSDSDPKRTGEAGDLEADADSLSCRQSGLSSNDQMEIDGPKLGTKRPRTGMPESFGQMGAMKNNLMQDAYKSDFGSLEISNSAITGVANEQIGTHLDWDDDDRGIGINIQALLSEFGDFDDFFQNDVLPFGEPPGTAESQALMFSAPDCGEVVSSPIGVMDVADQMLLPVSFPSFESFNPPPAEAIDECVSKNRESTLEPLTSCPVQHTPPPSTGEFEHLIKAEALMSFAPEYGAVETQTSELSSSIFRSPYYPKSRKVESSNSSPNNYRYGATPPSSPCIDGSDEKTSMTVNPKAGTARVDTKKYYTHVESGKEQHDRKLFTQTDSIATSDGIVPSSFSTFDSTNAVKSVLKKMTESAVGSESFILSMKTVLATEVESLMFQAYMCRVRHILLSSSNPTSVSLSRLSSSSVLGDLPGEGSTMTDNISSRYEVKKKESIPVRIAGDFDGGVLDGHLNAPVGVWRSVAVPKLTKPSNSPSIEVSTSLPHHSLNDERMFSYKHRQPLQELLDGMSLLVQQATSFVDVALDADCGDGPYGWLALQEHWRRGFSCGPSMVHAGCGGTLASCHSLDVAGMQLVDPLSSDIHAPSVISLLQSEIKTALKSAFGNLDGPLSVTDWCRGRGQSGDGVSTVDGSYAESMLSECKDSSSTVCLSVGEPMSPAQSSAGASSCLKVDGAKADDTGQRRLSQEIESEQLSSSRRPTVFVLPSPAVLVGYQDDWLKTPASSLQLWEKAPFEPYASPKPITYCVICPDIDPLTSAAADFFQQLGTVYETCKLGTHQPQSLGNQMEIDTGKLSYSGFVLLDCPQSMKIESSNTSLVGSISDYFLSLSNGWDMTSYLKSLSKAVKALKIGPCLSTNPKEGNTGPCMVIYVVCPFPEPIAVLQTVIESSVAVGSTFLSSDRERRQALLSQVGKALSCSAVVDEASPSNVLVLAGFSVPKLVLQIVTVDAIFRVASPALNELVILKETAFTVYNKARRISKGFSNDVQSSTLSGRSHSVIPQMNSIPAMWKDCVGPRLGGPTLPREGEMDAGLRSGSXXXXXXXXXXXXXXXXXHLHFLXNLTAESSKLLSDDSSGGFMQSSSSAVSADTGSSSQLDGSEPDGLGGGYQKTLPGLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDIAAAKPRDFVITRIGNFFELEYLEWQKAIYSVAGSEVKKWPLQLRRSMPDGMPASSNGANLQQQEMSLMQERNLPSSPSPLYSSHSKGSGFMKGGLGQSSGRKQLIGGHTVVDNSRGMLQWVQSISFATISIDHSLNLVFQADSPSPGGTQGGSGVGASGYLEGFTPVKSLGSTSASYILIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSMGKDYRSNSREEWPSVLSVSLIDYYGGTNIAQEKLSRGTGKQGVRTLSSEVRDYEIEIHLILESIAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELSSQPDKSQL